STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC76010.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.982
OUC79050.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC78105.1
NADPH-dependent 2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC77570.1
NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC77315.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC75900.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC75747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC75561.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.978
OUC76021.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
 0.976
gltD
Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
Your Current Organism:
Gordonia lacunae
NCBI taxonomy Id: 417102
Other names: DSM 45085, G. lacunae, Gordonia lacunae le Roes et al. 2009, JCM 14873, NRRL B-24551, strain BS2
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.