STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC75741.1Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)    
Predicted Functional Partners:
OUC80441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
OUC80090.1
ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.762
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.670
OUC75742.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.524
OUC75743.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.506
OUC80842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.485
OUC79752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.485
OUC79201.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.485
OUC79068.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.485
OUC77837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.485
Your Current Organism:
Gordonia lacunae
NCBI taxonomy Id: 417102
Other names: DSM 45085, G. lacunae, Gordonia lacunae le Roes et al. 2009, JCM 14873, NRRL B-24551, strain BS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.