STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ38606.1Protein of unknown function. (238 aa)    
Predicted Functional Partners:
SDL21530.1
Hypothetical protein.
  
     0.544
SDK20938.1
Hypothetical protein.
  
     0.506
SDJ69100.1
Protein of unknown function.
  
     0.465
SDJ38601.1
Right handed beta helix region.
       0.461
SDK20913.1
Hypothetical protein.
  
     0.458
SDK98238.1
Protein of unknown function.
  
     0.448
SDJ77842.1
Protein of unknown function.
  
     0.436
SDJ75282.1
Hypothetical protein.
  
     0.435
SDK09359.1
Lamin Tail Domain.
  
     0.434
SDJ55592.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
  
     0.431
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.