Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ35834.1 | SDJ35855.1 | SAMN05421806_10122 | SAMN05421806_10123 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Response regulator receiver domain-containing protein. | 0.563 |
SDJ35834.1 | SDJ35878.1 | SAMN05421806_10122 | SAMN05421806_10124 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.561 |
SDJ35834.1 | SDJ35895.1 | SAMN05421806_10122 | SAMN05421806_10125 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | HAMP domain-containing protein. | 0.406 |
SDJ35834.1 | SDJ35917.1 | SAMN05421806_10122 | SAMN05421806_10126 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.561 |
SDJ35855.1 | SDJ35834.1 | SAMN05421806_10123 | SAMN05421806_10122 | Response regulator receiver domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.563 |
SDJ35855.1 | SDJ35878.1 | SAMN05421806_10123 | SAMN05421806_10124 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.870 |
SDJ35855.1 | SDJ35895.1 | SAMN05421806_10123 | SAMN05421806_10125 | Response regulator receiver domain-containing protein. | HAMP domain-containing protein. | 0.930 |
SDJ35855.1 | SDJ35917.1 | SAMN05421806_10123 | SAMN05421806_10126 | Response regulator receiver domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.920 |
SDJ35878.1 | SDJ35834.1 | SAMN05421806_10124 | SAMN05421806_10122 | Hypothetical protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.561 |
SDJ35878.1 | SDJ35855.1 | SAMN05421806_10124 | SAMN05421806_10123 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.870 |
SDJ35878.1 | SDJ35895.1 | SAMN05421806_10124 | SAMN05421806_10125 | Hypothetical protein. | HAMP domain-containing protein. | 0.630 |
SDJ35878.1 | SDJ35917.1 | SAMN05421806_10124 | SAMN05421806_10126 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.590 |
SDJ35895.1 | SDJ35834.1 | SAMN05421806_10125 | SAMN05421806_10122 | HAMP domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.406 |
SDJ35895.1 | SDJ35855.1 | SAMN05421806_10125 | SAMN05421806_10123 | HAMP domain-containing protein. | Response regulator receiver domain-containing protein. | 0.930 |
SDJ35895.1 | SDJ35878.1 | SAMN05421806_10125 | SAMN05421806_10124 | HAMP domain-containing protein. | Hypothetical protein. | 0.630 |
SDJ35895.1 | SDJ35917.1 | SAMN05421806_10125 | SAMN05421806_10126 | HAMP domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.954 |
SDJ35917.1 | SDJ35834.1 | SAMN05421806_10126 | SAMN05421806_10122 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.561 |
SDJ35917.1 | SDJ35855.1 | SAMN05421806_10126 | SAMN05421806_10123 | Serine phosphatase RsbU, regulator of sigma subunit. | Response regulator receiver domain-containing protein. | 0.920 |
SDJ35917.1 | SDJ35878.1 | SAMN05421806_10126 | SAMN05421806_10124 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.590 |
SDJ35917.1 | SDJ35895.1 | SAMN05421806_10126 | SAMN05421806_10125 | Serine phosphatase RsbU, regulator of sigma subunit. | HAMP domain-containing protein. | 0.954 |