STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ43671.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SDK86430.1
Magnesium chelatase subunit D.
  
 0.955
SDJ43687.1
Glycerophosphoryl diester phosphodiesterase family protein.
       0.748
SDK03840.1
Protein of unknown function.
   
  0.696
SDK75048.1
Hypothetical protein.
   
  0.696
SDJ43715.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
       0.675
SDJ43735.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.675
SDJ43809.1
Peptide/nickel transport system substrate-binding protein.
       0.669
SDK86383.1
Cobaltochelatase CobN subunit.
  
 0.638
SDJ43903.1
NADPH2:quinone reductase.
       0.595
SDJ43929.1
Transcriptional regulator, contains XRE-family HTH domain.
       0.591
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.