Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ52383.1 | SDJ52394.1 | SAMN05421806_101815 | SAMN05421806_101816 | Enterobactin synthetase component F. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.996 |
SDJ52383.1 | SDJ52419.1 | SAMN05421806_101815 | SAMN05421806_101817 | Enterobactin synthetase component F. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.995 |
SDJ52383.1 | SDJ52435.1 | SAMN05421806_101815 | SAMN05421806_101818 | Enterobactin synthetase component F. | 2,3-dihydroxybenzoate-AMP ligase. | 0.959 |
SDJ52383.1 | SDJ52455.1 | SAMN05421806_101815 | SAMN05421806_101819 | Enterobactin synthetase component F. | Isochorismate synthase. | 0.879 |
SDJ52383.1 | SDJ52471.1 | SAMN05421806_101815 | SAMN05421806_101820 | Enterobactin synthetase component F. | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.660 |
SDJ52383.1 | SDJ52535.1 | SAMN05421806_101815 | SAMN05421806_101824 | Enterobactin synthetase component F. | MbtH protein. | 0.985 |
SDJ52383.1 | SDJ52559.1 | SAMN05421806_101815 | SAMN05421806_101825 | Enterobactin synthetase component F. | Nonribosomal peptide synthetase DhbF. | 0.954 |
SDJ52383.1 | SDK05209.1 | SAMN05421806_101815 | SAMN05421806_104217 | Enterobactin synthetase component F. | Acyl transferase domain-containing protein. | 0.996 |
SDJ52383.1 | SDL32046.1 | SAMN05421806_101815 | SAMN05421806_12727 | Enterobactin synthetase component F. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.984 |
SDJ52394.1 | SDJ52383.1 | SAMN05421806_101816 | SAMN05421806_101815 | Bifunctional isochorismate lyase / aryl carrier protein. | Enterobactin synthetase component F. | 0.996 |
SDJ52394.1 | SDJ52419.1 | SAMN05421806_101816 | SAMN05421806_101817 | Bifunctional isochorismate lyase / aryl carrier protein. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.990 |
SDJ52394.1 | SDJ52435.1 | SAMN05421806_101816 | SAMN05421806_101818 | Bifunctional isochorismate lyase / aryl carrier protein. | 2,3-dihydroxybenzoate-AMP ligase. | 0.999 |
SDJ52394.1 | SDJ52455.1 | SAMN05421806_101816 | SAMN05421806_101819 | Bifunctional isochorismate lyase / aryl carrier protein. | Isochorismate synthase. | 0.999 |
SDJ52394.1 | SDJ52471.1 | SAMN05421806_101816 | SAMN05421806_101820 | Bifunctional isochorismate lyase / aryl carrier protein. | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.983 |
SDJ52394.1 | SDJ52535.1 | SAMN05421806_101816 | SAMN05421806_101824 | Bifunctional isochorismate lyase / aryl carrier protein. | MbtH protein. | 0.990 |
SDJ52394.1 | SDJ52559.1 | SAMN05421806_101816 | SAMN05421806_101825 | Bifunctional isochorismate lyase / aryl carrier protein. | Nonribosomal peptide synthetase DhbF. | 0.999 |
SDJ52394.1 | SDK05209.1 | SAMN05421806_101816 | SAMN05421806_104217 | Bifunctional isochorismate lyase / aryl carrier protein. | Acyl transferase domain-containing protein. | 0.995 |
SDJ52394.1 | SDL32046.1 | SAMN05421806_101816 | SAMN05421806_12727 | Bifunctional isochorismate lyase / aryl carrier protein. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.997 |
SDJ52394.1 | trpE | SAMN05421806_101816 | SAMN05421806_104379 | Bifunctional isochorismate lyase / aryl carrier protein. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.929 |
SDJ52419.1 | SDJ52383.1 | SAMN05421806_101817 | SAMN05421806_101815 | Bifunctional isochorismate lyase / aryl carrier protein. | Enterobactin synthetase component F. | 0.995 |
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