STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ37110.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (228 aa)    
Predicted Functional Partners:
SDK34173.1
Signal transduction histidine kinase.
  
 0.976
SDJ37131.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 
 0.964
SDK61853.1
Signal transduction histidine kinase.
   
 0.876
SDK62401.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 
 0.848
SDJ75399.1
Signal transduction histidine kinase.
 
  0.741
SDL41660.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  0.720
SDJ79662.1
Signal transduction histidine kinase.
  
  0.681
SDL08420.1
Signal transduction histidine kinase.
  
  0.676
SDK39179.1
Histidine kinase.
  
  0.671
SDJ58988.1
Signal transduction histidine kinase.
  
  0.669
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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