STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ53065.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (214 aa)    
Predicted Functional Partners:
SDK34173.1
Signal transduction histidine kinase.
  
 0.976
SDJ53078.1
Histidine kinase.
 
 0.968
SDK61853.1
Signal transduction histidine kinase.
   
 0.876
SDK04309.1
Signal transduction histidine kinase.
 
 0.864
SDL26352.1
Signal transduction histidine kinase.
 
 0.850
SDL35472.1
Signal transduction histidine kinase.
  
 0.844
SDL35491.1
Signal transduction histidine kinase.
  
 0.844
SDK37580.1
Histidine kinase.
 
 0.837
SDJ91836.1
Signal transduction histidine kinase.
  
  0.825
SDJ47811.1
Signal transduction histidine kinase.
  
  0.824
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.