STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ73462.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
SDJ73485.1
Peptide/nickel transport system permease protein.
 
 
  0.971
SDJ73442.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.948
SDJ73527.1
Peptide/nickel transport system permease protein.
 
  0.941
SDK93558.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
  0.930
SDK93453.1
Oligopeptide transport system permease protein.
 
  0.929
SDJ73600.1
Peptide/nickel transport system permease protein.
 
  0.925
SDJ39157.1
Peptide/nickel transport system permease protein.
 
  0.924
SDJ73508.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.923
SDJ69338.1
Peptide/nickel transport system permease protein.
 
  0.915
SDJ73625.1
Peptide/nickel transport system permease protein.
 
 
  0.913
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.