STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ76389.1Protein of unknown function. (226 aa)    
Predicted Functional Partners:
SDJ76413.1
Hypothetical protein.
 
    0.972
SDJ76375.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.935
SDJ76423.1
Uncharacterized protein, MTH1187 family.
  
    0.743
SDJ76448.1
Integral membrane protein.
       0.741
SDJ76458.1
Uncharacterized conserved protein, AIM24 family.
       0.672
SDJ76481.1
Uncharacterized conserved protein, AIM24 family.
       0.672
SDJ76494.1
Biogenesis AIM24.
       0.672
SDJ76354.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
       0.486
SDJ76345.1
Protein of unknown function.
       0.484
SDJ45240.1
Uncharacterized membrane protein YeiB.
  
     0.456
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.