STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ94539.1Putative tricarboxylic transport membrane protein. (513 aa)    
Predicted Functional Partners:
SDJ94560.1
Putative tricarboxylic transport membrane protein.
 
 
 0.998
SDJ94587.1
Putative tricarboxylic transport membrane protein.
 
  
 0.998
SDJ94606.1
Response regulator of citrate/malate metabolism.
 
     0.898
SDJ94515.1
Predicted N-acetyltransferase YhbS.
       0.808
SDK32171.1
Two-component system, CitB family, sensor kinase.
 
     0.478
SDK32186.1
Two-component system, CitB family, response regulator.
 
     0.445
SDJ75806.1
Sensor histidine kinase regulating citrate/malate metabolism.
 
     0.430
kdpA
K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.
      
 0.429
SDJ75818.1
Response regulator of citrate/malate metabolism.
 
     0.401
SDK33393.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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