STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ87338.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
SDJ87352.1
Probable F420-dependent oxidoreductase, Rv2161c family.
       0.590
SDJ87307.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
       0.557
SDK62692.1
Hypothetical protein.
  
     0.554
SDL34562.1
Hypothetical protein.
  
     0.547
SDJ87080.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.537
SDJ87095.1
Fucose permease.
       0.537
SDL10312.1
Hypothetical protein.
  
     0.530
SDK41074.1
PH domain-containing protein.
  
     0.503
SDK91100.1
Hypothetical protein.
  
     0.498
SDK88124.1
Hypothetical protein.
  
     0.494
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.