Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ57772.1 | SDJ60644.1 | SAMN05421806_1011092 | SAMN05421806_1011235 | Glycine/D-amino acid oxidase. | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.970 |
SDJ57772.1 | SDJ85862.1 | SAMN05421806_1011092 | SAMN05421806_10320 | Glycine/D-amino acid oxidase. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.439 |
SDJ57772.1 | SDJ85954.1 | SAMN05421806_1011092 | SAMN05421806_10324 | Glycine/D-amino acid oxidase. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.914 |
SDJ57772.1 | SDK07033.1 | SAMN05421806_1011092 | SAMN05421806_104300 | Glycine/D-amino acid oxidase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.833 |
SDJ57772.1 | SDK09233.1 | SAMN05421806_1011092 | SAMN05421806_104397 | Glycine/D-amino acid oxidase. | Glutamate synthase (NADH) large subunit. | 0.872 |
SDJ57772.1 | SDK87917.1 | SAMN05421806_1011092 | SAMN05421806_113131 | Glycine/D-amino acid oxidase. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.439 |
SDJ60644.1 | SDJ57772.1 | SAMN05421806_1011235 | SAMN05421806_1011092 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glycine/D-amino acid oxidase. | 0.970 |
SDJ60644.1 | SDJ85862.1 | SAMN05421806_1011235 | SAMN05421806_10320 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.832 |
SDJ60644.1 | SDJ85954.1 | SAMN05421806_1011235 | SAMN05421806_10324 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.791 |
SDJ60644.1 | SDJ85999.1 | SAMN05421806_1011235 | SAMN05421806_10326 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Rieske 2Fe-2S family protein. | 0.795 |
SDJ60644.1 | SDK07033.1 | SAMN05421806_1011235 | SAMN05421806_104300 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.889 |
SDJ60644.1 | SDK09233.1 | SAMN05421806_1011235 | SAMN05421806_104397 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glutamate synthase (NADH) large subunit. | 0.949 |
SDJ60644.1 | SDK59665.1 | SAMN05421806_1011235 | SAMN05421806_10956 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Reductase C-terminal. | 0.850 |
SDJ60644.1 | SDK87917.1 | SAMN05421806_1011235 | SAMN05421806_113131 | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.805 |
SDJ85862.1 | SDJ57772.1 | SAMN05421806_10320 | SAMN05421806_1011092 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Glycine/D-amino acid oxidase. | 0.439 |
SDJ85862.1 | SDJ60644.1 | SAMN05421806_10320 | SAMN05421806_1011235 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.832 |
SDJ85862.1 | SDJ85954.1 | SAMN05421806_10320 | SAMN05421806_10324 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.710 |
SDJ85862.1 | SDJ85999.1 | SAMN05421806_10320 | SAMN05421806_10326 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Rieske 2Fe-2S family protein. | 0.910 |
SDJ85862.1 | SDK07033.1 | SAMN05421806_10320 | SAMN05421806_104300 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.973 |
SDJ85862.1 | SDK09233.1 | SAMN05421806_10320 | SAMN05421806_104397 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Glutamate synthase (NADH) large subunit. | 0.661 |
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