STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK17115.1DNA-binding transcriptional regulator, MarR family. (300 aa)    
Predicted Functional Partners:
SDJ77442.1
PTS system, beta-glucosides-specific IIC component.
   
 
 0.649
SDK17127.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
 
     0.595
SDK17150.1
Biflaviolin synthase/biflaviolin synthase; Belongs to the cytochrome P450 family.
       0.531
SDK34173.1
Signal transduction histidine kinase.
  
 
 0.524
SDK59220.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
   0.472
SDJ72600.1
Urease subunit gamma/beta.
  
 
  0.458
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.437
SDL19878.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
 
 0.437
SDL17246.1
PTS system, sucrose-specific IIC component.
     
 0.429
SDJ48902.1
Cupin domain-containing protein.
  
 0.425
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.