STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK19390.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
SDJ49816.1
Short chain enoyl-CoA hydratase.
  
 0.932
SDJ40080.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.903
SDJ40102.1
Electron transfer flavoprotein beta subunit.
 
 
 0.893
SDJ95040.1
glutaryl-CoA dehydrogenase.
  
  
 
0.873
SDK28844.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.873
SDL16051.1
enoyl-CoA hydratase.
   
 0.873
SDK96926.1
3-methylcrotonyl-CoA carboxylase beta subunit.
   
 
  0.862
SDK16791.1
enoyl-CoA hydratase.
   
  0.842
SDK28870.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.776
SDJ70175.1
Acyl-CoA dehydrogenase.
  
  
  0.771
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.