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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK27685.1Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. (368 aa)    
Predicted Functional Partners:
SDJ59303.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.753
SDL19459.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.729
SDJ95550.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.718
SDK27664.1
HD domain-containing protein.
 
     0.673
SDK97666.1
LysR family transcriptional regulator, chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
   
    0.672
SDJ76276.1
DNA-binding transcriptional regulator, MarR family.
   
    0.631
SDK87977.1
Predicted transcriptional regulator, ArsR family.
   
    0.599
SDJ42148.1
Predicted ATPase.
  
    0.579
SDJ88654.1
Predicted ATPase.
  
    0.577
SDK18613.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
  
    0.558
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.