Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ75452.1 | SDK61576.1 | SAMN05421806_102346 | SAMN05421806_109147 | ATP-binding cassette, subfamily B. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.476 |
SDJ94997.1 | SDK61576.1 | SAMN05421806_103449 | SAMN05421806_109147 | Hypothetical protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.487 |
SDK04107.1 | SDK61576.1 | SAMN05421806_104158 | SAMN05421806_109147 | Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.556 |
SDK61559.1 | SDK61576.1 | SAMN05421806_109146 | SAMN05421806_109147 | Histidine triad (HIT) family protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.575 |
SDK61559.1 | SDK61593.1 | SAMN05421806_109146 | SAMN05421806_109148 | Histidine triad (HIT) family protein. | Hypothetical protein. | 0.699 |
SDK61559.1 | rnz | SAMN05421806_109146 | SAMN05421806_109145 | Histidine triad (HIT) family protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.802 |
SDK61576.1 | SDJ75452.1 | SAMN05421806_109147 | SAMN05421806_102346 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | ATP-binding cassette, subfamily B. | 0.476 |
SDK61576.1 | SDJ94997.1 | SAMN05421806_109147 | SAMN05421806_103449 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Hypothetical protein. | 0.487 |
SDK61576.1 | SDK04107.1 | SAMN05421806_109147 | SAMN05421806_104158 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. | 0.556 |
SDK61576.1 | SDK61559.1 | SAMN05421806_109147 | SAMN05421806_109146 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Histidine triad (HIT) family protein. | 0.575 |
SDK61576.1 | SDK61593.1 | SAMN05421806_109147 | SAMN05421806_109148 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Hypothetical protein. | 0.623 |
SDK61576.1 | SDL03074.1 | SAMN05421806_109147 | SAMN05421806_116158 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Repeat domain-containing protein. | 0.488 |
SDK61576.1 | SDL39504.1 | SAMN05421806_109147 | SAMN05421806_1343 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.482 |
SDK61576.1 | ftsZ | SAMN05421806_109147 | SAMN05421806_104329 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.487 |
SDK61576.1 | pheT | SAMN05421806_109147 | SAMN05421806_103269 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.533 |
SDK61576.1 | rnz | SAMN05421806_109147 | SAMN05421806_109145 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.546 |
SDK61593.1 | SDK61559.1 | SAMN05421806_109148 | SAMN05421806_109146 | Hypothetical protein. | Histidine triad (HIT) family protein. | 0.699 |
SDK61593.1 | SDK61576.1 | SAMN05421806_109148 | SAMN05421806_109147 | Hypothetical protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.623 |
SDK61593.1 | rnz | SAMN05421806_109148 | SAMN05421806_109145 | Hypothetical protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.669 |
SDL03074.1 | SDK61576.1 | SAMN05421806_116158 | SAMN05421806_109147 | Repeat domain-containing protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.488 |
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