STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK62026.1Pimeloyl-ACP methyl ester carboxylesterase. (267 aa)    
Predicted Functional Partners:
SDK05209.1
Acyl transferase domain-containing protein.
  
 0.683
SDJ42598.1
2-keto-4-pentenoate hydratase.
   
 
 0.611
SDJ41216.1
3-oxoadipate enol-lactonase.
  
  
  0.607
SDJ52559.1
Nonribosomal peptide synthetase DhbF.
   
 0.607
SDJ52754.1
ABC-type branched-chain amino acid transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.606
SDJ38229.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.563
SDK61996.1
DNA polymerase III, delta subunit.
       0.514
SDJ75970.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.482
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  0.477
SDK59220.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.460
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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