STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK69079.1alpha-L-fucosidase. (545 aa)    
Predicted Functional Partners:
SDJ50031.1
Hexosaminidase.
 
  
 0.745
SDK68601.1
Hexosaminidase.
 
  
 0.741
SDK76153.1
Hexosaminidase.
 
  
 0.699
SDK96815.1
Hexosaminidase.
 
  
 0.689
SDK09955.1
Beta-galactosidase.
  
 0.671
SDJ41339.1
Predicted dehydrogenase.
  
     0.643
SDJ61298.1
Beta-galactosidase.
 
   
 0.543
SDK29363.1
Alpha-1,2-mannosidase, putative.
 
   
 0.464
SDJ47230.1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.445
SDK69065.1
Protein of unknown function.
       0.427
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.