STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK67696.1PTS system, N-acetylglucosamine-specific IIC component. (415 aa)    
Predicted Functional Partners:
SDJ77442.1
PTS system, beta-glucosides-specific IIC component.
 0.985
SDJ85471.1
PTS system, N-acetylglucosamine-specific IIA component.
 0.984
SDK67675.1
PTS system, N-acetylglucosamine-specific IIC component.
 
  
 
0.939
SDK67655.1
PTS system N-acetylglucosamine-specific IIB component, Glc family.
 
 
 0.906
SDK31798.1
Phosphocarrier protein HPr.
 
 
 0.880
SDL17640.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.859
SDL19931.1
PTS system, fructose-specific IIC component.
  
  
 0.801
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 
 0.786
SDL06510.1
PTS system, fructose-specific IIC component.
  
  
 0.776
SDJ85488.1
Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.754
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.