STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL24093.1Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain. (113 aa)    
Predicted Functional Partners:
SDL24078.1
Predicted phosphohydrolase, MPP superfamily.
       0.762
SDL24113.1
Hypothetical protein.
       0.737
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.537
crcB-2
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.537
SDK07355.1
Protein of unknown function.
  
     0.413
SDJ54132.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
  
     0.410
SDK05880.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
 
     0.400
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.