STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL28160.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
SDL28137.1
Hypothetical protein.
       0.545
SDL28099.1
Hypothetical protein.
       0.538
SDL28114.1
Hypothetical protein.
       0.538
SDL28078.1
Hypothetical protein.
       0.527
SDL27995.1
Hypothetical protein.
       0.514
SDL28024.1
Methyltransferase domain-containing protein.
       0.514
SDL28041.1
Pectate lyase superfamily protein.
       0.514
SDL28054.1
Hypothetical protein.
       0.514
SDL27970.1
Hypothetical protein.
       0.484
SDL28168.1
Hypothetical protein.
       0.428
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.