STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL29104.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
SDL28990.1
Hypothetical protein.
       0.786
SDL28929.1
Hypothetical protein.
       0.773
SDL29017.1
Hypothetical protein.
       0.773
SDL29034.1
Hypothetical protein.
       0.773
SDL29055.1
Hypothetical protein.
       0.773
SDL29075.1
Hypothetical protein.
       0.773
SDL29093.1
Hypothetical protein.
       0.773
SDL29121.1
Hypothetical protein.
       0.531
SDL28883.1
Recombination protein RecT.
       0.458
SDL28910.1
Putative phage-type endonuclease.
       0.458
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.