STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL30336.1Chitinase; Belongs to the glycosyl hydrolase 18 family. (599 aa)    
Predicted Functional Partners:
SDK40294.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 0.979
SDJ44283.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 0.977
SDJ76986.1
Chitinase.
 
 0.964
SDL00507.1
Chitinase.
 
 
 0.915
SDL01478.1
Chitin-binding protein.
 
 
 0.883
SDL01555.1
F5/8 type C domain-containing protein.
 
 
 0.871
SDK04601.1
Fibronectin type III domain-containing protein.
 
 
 0.862
SDK39359.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 
0.861
SDL01584.1
Protein of unknown function.
 
  
 0.858
SDL01409.1
Endoglucanase.
 
  
 0.821
Your Current Organism:
Streptomyces indicus
NCBI taxonomy Id: 417292
Other names: CGMCC 4.5727, DSM 42001, S. indicus, Streptomyces indicus Luo et al. 2011, Streptomyces sp. IH32-1, strain IH32-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.