Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ51289.1 | SDJ51445.1 | SAMN05421806_101760 | SAMN05421806_101768 | FMN reductase. | Alkanesulfonate monooxygenase. | 0.984 |
SDJ51289.1 | SDJ61599.1 | SAMN05421806_101760 | SAMN05421806_1011282 | FMN reductase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.908 |
SDJ51289.1 | SDJ61641.1 | SAMN05421806_101760 | SAMN05421806_1011284 | FMN reductase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.916 |
SDJ51289.1 | SDJ69426.1 | SAMN05421806_101760 | SAMN05421806_10236 | FMN reductase. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.952 |
SDJ51289.1 | SDK64119.1 | SAMN05421806_101760 | SAMN05421806_109278 | FMN reductase. | Alkanesulfonate monooxygenase. | 0.986 |
SDJ51289.1 | SDK99013.1 | SAMN05421806_101760 | SAMN05421806_115176 | FMN reductase. | Sulfonate transport system permease protein. | 0.951 |
SDJ51289.1 | SDK99048.1 | SAMN05421806_101760 | SAMN05421806_115178 | FMN reductase. | Sulfonate transport system substrate-binding protein. | 0.966 |
SDJ51289.1 | SDL06877.1 | SAMN05421806_101760 | SAMN05421806_117150 | FMN reductase. | Taurine dioxygenase. | 0.951 |
SDJ51289.1 | SDL31999.1 | SAMN05421806_101760 | SAMN05421806_12725 | FMN reductase. | FMN reductase. | 0.910 |
SDJ51289.1 | ssuB | SAMN05421806_101760 | SAMN05421806_115177 | FMN reductase. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.936 |
SDJ51445.1 | SDJ51289.1 | SAMN05421806_101768 | SAMN05421806_101760 | Alkanesulfonate monooxygenase. | FMN reductase. | 0.984 |
SDJ51445.1 | SDJ61599.1 | SAMN05421806_101768 | SAMN05421806_1011282 | Alkanesulfonate monooxygenase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.907 |
SDJ51445.1 | SDK64119.1 | SAMN05421806_101768 | SAMN05421806_109278 | Alkanesulfonate monooxygenase. | Alkanesulfonate monooxygenase. | 0.926 |
SDJ51445.1 | SDK99013.1 | SAMN05421806_101768 | SAMN05421806_115176 | Alkanesulfonate monooxygenase. | Sulfonate transport system permease protein. | 0.955 |
SDJ51445.1 | SDK99048.1 | SAMN05421806_101768 | SAMN05421806_115178 | Alkanesulfonate monooxygenase. | Sulfonate transport system substrate-binding protein. | 0.978 |
SDJ51445.1 | SDL06877.1 | SAMN05421806_101768 | SAMN05421806_117150 | Alkanesulfonate monooxygenase. | Taurine dioxygenase. | 0.950 |
SDJ51445.1 | SDL31999.1 | SAMN05421806_101768 | SAMN05421806_12725 | Alkanesulfonate monooxygenase. | FMN reductase. | 0.755 |
SDJ51445.1 | ssuB | SAMN05421806_101768 | SAMN05421806_115177 | Alkanesulfonate monooxygenase. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.946 |
SDJ61599.1 | SDJ51289.1 | SAMN05421806_1011282 | SAMN05421806_101760 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FMN reductase. | 0.908 |
SDJ61599.1 | SDJ51445.1 | SAMN05421806_1011282 | SAMN05421806_101768 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Alkanesulfonate monooxygenase. | 0.907 |
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