Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL40692.1 | SDL40709.1 | SAMN05421806_1362 | SAMN05421806_1363 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.978 |
SDL40692.1 | SDL40751.1 | SAMN05421806_1362 | SAMN05421806_1365 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.730 |
SDL40692.1 | SDL40790.1 | SAMN05421806_1362 | SAMN05421806_1367 | ABC-2 type transport system permease protein. | DNA-binding transcriptional regulator, AcrR family. | 0.713 |
SDL40692.1 | SDL40822.1 | SAMN05421806_1362 | SAMN05421806_1368 | ABC-2 type transport system permease protein. | Sugar phosphate isomerase/epimerase. | 0.404 |
SDL40709.1 | SDL40692.1 | SAMN05421806_1363 | SAMN05421806_1362 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.978 |
SDL40709.1 | SDL40751.1 | SAMN05421806_1363 | SAMN05421806_1365 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.730 |
SDL40709.1 | SDL40790.1 | SAMN05421806_1363 | SAMN05421806_1367 | ABC-2 type transport system ATP-binding protein. | DNA-binding transcriptional regulator, AcrR family. | 0.526 |
SDL40709.1 | SDL40822.1 | SAMN05421806_1363 | SAMN05421806_1368 | ABC-2 type transport system ATP-binding protein. | Sugar phosphate isomerase/epimerase. | 0.407 |
SDL40751.1 | SDL40692.1 | SAMN05421806_1365 | SAMN05421806_1362 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.730 |
SDL40751.1 | SDL40709.1 | SAMN05421806_1365 | SAMN05421806_1363 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.730 |
SDL40751.1 | SDL40790.1 | SAMN05421806_1365 | SAMN05421806_1367 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.437 |
SDL40751.1 | ilvD | SAMN05421806_1365 | SAMN05421806_1366 | Hypothetical protein. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.768 |
SDL40790.1 | SDL40692.1 | SAMN05421806_1367 | SAMN05421806_1362 | DNA-binding transcriptional regulator, AcrR family. | ABC-2 type transport system permease protein. | 0.713 |
SDL40790.1 | SDL40709.1 | SAMN05421806_1367 | SAMN05421806_1363 | DNA-binding transcriptional regulator, AcrR family. | ABC-2 type transport system ATP-binding protein. | 0.526 |
SDL40790.1 | SDL40751.1 | SAMN05421806_1367 | SAMN05421806_1365 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.437 |
SDL40790.1 | SDL40822.1 | SAMN05421806_1367 | SAMN05421806_1368 | DNA-binding transcriptional regulator, AcrR family. | Sugar phosphate isomerase/epimerase. | 0.766 |
SDL40790.1 | SDL40845.1 | SAMN05421806_1367 | SAMN05421806_1369 | DNA-binding transcriptional regulator, AcrR family. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.766 |
SDL40790.1 | SDL40868.1 | SAMN05421806_1367 | SAMN05421806_13610 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.706 |
SDL40790.1 | ilvD | SAMN05421806_1367 | SAMN05421806_1366 | DNA-binding transcriptional regulator, AcrR family. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.741 |
SDL40822.1 | SDL40692.1 | SAMN05421806_1368 | SAMN05421806_1362 | Sugar phosphate isomerase/epimerase. | ABC-2 type transport system permease protein. | 0.404 |
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