STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argRUnannotated protein; Regulates arginine biosynthesis genes. (152 aa)    
Predicted Functional Partners:
argR-3
Unannotated protein; Regulates arginine biosynthesis genes.
  
     0.775
FC21_GL001160
Unannotated protein.
       0.732
FC21_GL000579
Unannotated protein.
  
  
 0.675
argH
Unannotated protein.
  
  
 0.675
FC21_GL000514
Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.573
argS
Unannotated protein.
  
  
 0.501
FC21_GL001158
Unannotated protein.
       0.483
FC21_GL001045
Unannotated protein.
  
    0.480
pheT
Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.470
FC21_GL001161
Unannotated protein.
       0.451
Your Current Organism:
Lactobacillus equigenerosi
NCBI taxonomy Id: 417373
Other names: DSM 18793, JCM 14505, L. equigenerosi, Lactobacillus equigenerosi Endo et al. 2008, NRIC 0697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.