STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC21_GL000230Unannotated protein. (278 aa)    
Predicted Functional Partners:
FC21_GL000287
Unannotated protein.
  
     0.654
FC21_GL000794
Unannotated protein.
 
     0.592
FC21_GL001313
Unannotated protein.
  
     0.493
FC21_GL000828
Unannotated protein.
  
     0.469
FC21_GL000488
Unannotated protein.
  
     0.435
FC21_GL000917
Unannotated protein.
  
     0.432
FC21_GL001447
Unannotated protein.
  
     0.412
FC21_GL000229
Unannotated protein.
       0.405
Your Current Organism:
Lactobacillus equigenerosi
NCBI taxonomy Id: 417373
Other names: DSM 18793, JCM 14505, L. equigenerosi, Lactobacillus equigenerosi Endo et al. 2008, NRIC 0697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.