STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC21_GL000016Unannotated protein. (81 aa)    
Predicted Functional Partners:
FC21_GL000019
Unannotated protein.
 
     0.780
mprF-2
Unannotated protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
       0.779
FC21_GL000018
Unannotated protein.
       0.734
FC21_GL000878
Unannotated protein.
  
     0.642
FC21_GL000531
Unannotated protein.
  
     0.601
FC21_GL000664
Unannotated protein.
 
     0.593
FC21_GL001073
Unannotated protein.
  
     0.573
FC21_GL000835
Unannotated protein.
  
     0.568
FC21_GL001254
Unannotated protein.
  
     0.568
FC21_GL001299
Unannotated protein.
  
     0.560
Your Current Organism:
Lactobacillus equigenerosi
NCBI taxonomy Id: 417373
Other names: DSM 18793, JCM 14505, L. equigenerosi, Lactobacillus equigenerosi Endo et al. 2008, NRIC 0697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.