STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FC21_GL000787Unannotated protein. (159 aa)    
Predicted Functional Partners:
FC21_GL000035
Unannotated protein; Belongs to the CinA family.
    
  0.949
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
  0.913
FC21_GL000783
Unannotated protein.
 
     0.723
FC21_GL000785
Unannotated protein.
     
 0.680
GCA_001570685_01527
Unannotated protein.
       0.661
GCA_001570685_01529
Unannotated protein.
 
     0.656
FC21_GL000778
Unannotated protein.
 
     0.645
FC21_GL001378
Unannotated protein.
 
     0.644
FC21_GL000855
Unannotated protein.
   
 0.517
cshA
Unannotated protein; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
   
 0.517
Your Current Organism:
Lactobacillus equigenerosi
NCBI taxonomy Id: 417373
Other names: DSM 18793, JCM 14505, L. equigenerosi, Lactobacillus equigenerosi Endo et al. 2008, NRIC 0697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.