STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_01367Elongation factor EF-3. (1056 aa)    
Predicted Functional Partners:
PGTG_01590
Uncharacterized protein.
  
 
0.997
PGTG_01820
Uncharacterized protein.
   
 
 0.996
PGTG_07099
40S ribosomal protein S9-B.
  
 
 0.995
PGTG_10778
Elongation factor EF-3.
  
 
0.995
PGTG_11035
40S ribosomal protein S13, variant; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.995
PGTG_19578
Uncharacterized protein.
  
 
0.995
PGTG_20023
S4 RNA-binding domain-containing protein.
  
 
 0.995
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.994
PGTG_10206
Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.994
PGTG_10247
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.994
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
Server load: low (18%) [HD]