STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_05077Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
PGTG_09616
Small subunit ribosomal protein S24e.
  
 0.996
PGTG_10206
Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family.
   
 0.996
PGTG_18358
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.996
PGTG_00124
40S ribosomal protein S20.
   
 0.995
PGTG_00819
Uncharacterized protein.
   
 0.995
PGTG_00820
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.995
PGTG_02546
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.
   
 0.995
PGTG_02833
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.995
PGTG_03874
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.995
PGTG_04599
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.995
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.