Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGTG_03402 | PGTG_08685 | E3JZH1 | E3KGS4 | CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.999 |
PGTG_03402 | PGTG_12972 | E3JZH1 | E3KQL5 | CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.578 |
PGTG_03814 | PGTG_12972 | E3K0N3 | E3KQL5 | DNA_LIGASE_A3 domain-containing protein. | Uncharacterized protein. | 0.508 |
PGTG_03814 | PGTG_16383 | E3K0N3 | E3L3R7 | DNA_LIGASE_A3 domain-containing protein. | Uncharacterized protein. | 0.914 |
PGTG_03814 | PGTG_16384 | E3K0N3 | E3L3R8 | DNA_LIGASE_A3 domain-containing protein. | Ku domain-containing protein. | 0.914 |
PGTG_03814 | PGTG_17028 | E3K0N3 | E3L499 | DNA_LIGASE_A3 domain-containing protein. | Ku domain-containing protein. | 0.972 |
PGTG_03814 | PGTG_21909 | E3K0N3 | H6QT04 | DNA_LIGASE_A3 domain-containing protein. | DNA ligase. | 0.900 |
PGTG_06600 | PGTG_08685 | E3K8T8 | E3KGS4 | CMGC/CDK protein kinase; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.996 |
PGTG_06600 | PGTG_12972 | E3K8T8 | E3KQL5 | CMGC/CDK protein kinase; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.578 |
PGTG_08685 | PGTG_03402 | E3KGS4 | E3JZH1 | Uncharacterized protein. | CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. | 0.999 |
PGTG_08685 | PGTG_06600 | E3KGS4 | E3K8T8 | Uncharacterized protein. | CMGC/CDK protein kinase; Belongs to the protein kinase superfamily. | 0.996 |
PGTG_08685 | PGTG_12972 | E3KGS4 | E3KQL5 | Uncharacterized protein. | Uncharacterized protein. | 0.927 |
PGTG_12168 | PGTG_12972 | E3KPH7 | E3KQL5 | DNA ligase. | Uncharacterized protein. | 0.403 |
PGTG_12168 | PGTG_16383 | E3KPH7 | E3L3R7 | DNA ligase. | Uncharacterized protein. | 0.800 |
PGTG_12168 | PGTG_16384 | E3KPH7 | E3L3R8 | DNA ligase. | Ku domain-containing protein. | 0.800 |
PGTG_12168 | PGTG_17028 | E3KPH7 | E3L499 | DNA ligase. | Ku domain-containing protein. | 0.930 |
PGTG_12168 | PGTG_21909 | E3KPH7 | H6QT04 | DNA ligase. | DNA ligase. | 0.434 |
PGTG_12972 | PGTG_03402 | E3KQL5 | E3JZH1 | Uncharacterized protein. | CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. | 0.578 |
PGTG_12972 | PGTG_03814 | E3KQL5 | E3K0N3 | Uncharacterized protein. | DNA_LIGASE_A3 domain-containing protein. | 0.508 |
PGTG_12972 | PGTG_06600 | E3KQL5 | E3K8T8 | Uncharacterized protein. | CMGC/CDK protein kinase; Belongs to the protein kinase superfamily. | 0.578 |
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