Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGTG_00050 | PGTG_02318 | E3JQ11 | E3JXT2 | Mitochondrial-processing peptidase subunit beta. | Uncharacterized protein. | 0.967 |
PGTG_00050 | PGTG_02872 | E3JQ11 | E3JWK6 | Mitochondrial-processing peptidase subunit beta. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.999 |
PGTG_00050 | PGTG_03025 | E3JQ11 | E3JYE4 | Mitochondrial-processing peptidase subunit beta. | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.994 |
PGTG_00050 | PGTG_04591 | E3JQ11 | E3K2R6 | Mitochondrial-processing peptidase subunit beta. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.988 |
PGTG_00050 | PGTG_05065 | E3JQ11 | E3K6A9 | Mitochondrial-processing peptidase subunit beta. | zf-CHCC domain-containing protein. | 0.979 |
PGTG_00050 | PGTG_06714 | E3JQ11 | E3K8H6 | Mitochondrial-processing peptidase subunit beta. | NADH dehydrogenase (Ubiquinone) Fe-S protein 3; Belongs to the complex I 30 kDa subunit family. | 0.994 |
PGTG_00050 | PGTG_06894 | E3JQ11 | E3KAB6 | Mitochondrial-processing peptidase subunit beta. | NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family. | 0.998 |
PGTG_00050 | PGTG_07805 | E3JQ11 | E3KB24 | Mitochondrial-processing peptidase subunit beta. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.997 |
PGTG_00050 | PGTG_08821 | E3JQ11 | E3KE92 | Mitochondrial-processing peptidase subunit beta. | Uncharacterized protein. | 0.973 |
PGTG_00050 | PGTG_12713 | E3JQ11 | E3KRP7 | Mitochondrial-processing peptidase subunit beta. | NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9. | 0.999 |
PGTG_02318 | PGTG_00050 | E3JXT2 | E3JQ11 | Uncharacterized protein. | Mitochondrial-processing peptidase subunit beta. | 0.967 |
PGTG_02318 | PGTG_02872 | E3JXT2 | E3JWK6 | Uncharacterized protein. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.989 |
PGTG_02318 | PGTG_03025 | E3JXT2 | E3JYE4 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
PGTG_02318 | PGTG_04591 | E3JXT2 | E3K2R6 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
PGTG_02318 | PGTG_05065 | E3JXT2 | E3K6A9 | Uncharacterized protein. | zf-CHCC domain-containing protein. | 0.999 |
PGTG_02318 | PGTG_06714 | E3JXT2 | E3K8H6 | Uncharacterized protein. | NADH dehydrogenase (Ubiquinone) Fe-S protein 3; Belongs to the complex I 30 kDa subunit family. | 0.999 |
PGTG_02318 | PGTG_06894 | E3JXT2 | E3KAB6 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family. | 0.997 |
PGTG_02318 | PGTG_07805 | E3JXT2 | E3KB24 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.999 |
PGTG_02318 | PGTG_08821 | E3JXT2 | E3KE92 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
PGTG_02318 | PGTG_12713 | E3JXT2 | E3KRP7 | Uncharacterized protein. | NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9. | 0.999 |
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