STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_16061Large subunit ribosomal protein L18Ae. (82 aa)    
Predicted Functional Partners:
PGTG_01590
Uncharacterized protein.
   
   0.990
PGTG_01367
Elongation factor EF-3.
   
   0.990
PGTG_10778
Elongation factor EF-3.
   
   0.990
PGTG_19578
Uncharacterized protein.
   
   0.990
PGTG_02261
Large subunit ribosomal protein L7e.
   
 0.981
PGTG_03952
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.981
PGTG_07098
60S ribosomal protein L21-A.
  
 0.981
PGTG_10401
Large subunit ribosomal protein L14e.
   
 0.981
PGTG_04124
50S ribosomal protein L19e.
   
 0.980
PGTG_08428
60S ribosomal protein.
   
 0.980
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.