Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGTG_00769 | PGTG_04663 | E3JTP5 | E3K3Q5 | Flavoprotein domain-containing protein. | Nucleoside diphosphate kinase. | 0.598 |
PGTG_00769 | PGTG_04956 | E3JTP5 | E3K3E3 | Flavoprotein domain-containing protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.434 |
PGTG_00769 | PGTG_06907 | E3JTP5 | E3KAC9 | Flavoprotein domain-containing protein. | Single-strand binding protein family. | 0.431 |
PGTG_00769 | PGTG_10935 | E3JTP5 | E3KMX0 | Flavoprotein domain-containing protein. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.657 |
PGTG_00769 | PGTG_15305 | E3JTP5 | E3KYR7 | Flavoprotein domain-containing protein. | Thymidylate synthase. | 0.616 |
PGTG_00769 | PGTG_16050 | E3JTP5 | E3L1N8 | Flavoprotein domain-containing protein. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.657 |
PGTG_00769 | PGTG_17029 | E3JTP5 | E3L4A0 | Flavoprotein domain-containing protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.496 |
PGTG_00769 | PGTG_18161 | E3JTP5 | E3L696 | Flavoprotein domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.788 |
PGTG_00769 | PGTG_21766 | E3JTP5 | H6QSF0 | Flavoprotein domain-containing protein. | Uncharacterized protein. | 0.434 |
PGTG_03648 | PGTG_18161 | E3K067 | E3L696 | Nudix hydrolase domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.741 |
PGTG_04663 | PGTG_00769 | E3K3Q5 | E3JTP5 | Nucleoside diphosphate kinase. | Flavoprotein domain-containing protein. | 0.598 |
PGTG_04663 | PGTG_04956 | E3K3Q5 | E3K3E3 | Nucleoside diphosphate kinase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.411 |
PGTG_04663 | PGTG_06907 | E3K3Q5 | E3KAC9 | Nucleoside diphosphate kinase. | Single-strand binding protein family. | 0.454 |
PGTG_04663 | PGTG_17029 | E3K3Q5 | E3L4A0 | Nucleoside diphosphate kinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.497 |
PGTG_04663 | PGTG_18161 | E3K3Q5 | E3L696 | Nucleoside diphosphate kinase. | Zn(2)-C6 fungal-type domain-containing protein. | 0.726 |
PGTG_04663 | PGTG_21766 | E3K3Q5 | H6QSF0 | Nucleoside diphosphate kinase. | Uncharacterized protein. | 0.411 |
PGTG_04956 | PGTG_00769 | E3K3E3 | E3JTP5 | Glyceraldehyde-3-phosphate dehydrogenase. | Flavoprotein domain-containing protein. | 0.434 |
PGTG_04956 | PGTG_04663 | E3K3E3 | E3K3Q5 | Glyceraldehyde-3-phosphate dehydrogenase. | Nucleoside diphosphate kinase. | 0.411 |
PGTG_04956 | PGTG_17029 | E3K3E3 | E3L4A0 | Glyceraldehyde-3-phosphate dehydrogenase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.999 |
PGTG_04956 | PGTG_18161 | E3K3E3 | E3L696 | Glyceraldehyde-3-phosphate dehydrogenase. | Zn(2)-C6 fungal-type domain-containing protein. | 0.755 |
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