STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_18161Zn(2)-C6 fungal-type domain-containing protein. (156 aa)    
Predicted Functional Partners:
PGTG_06907
Single-strand binding protein family.
   
 
 0.925
PGTG_00769
Flavoprotein domain-containing protein.
  
 
 0.788
PGTG_04956
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.755
PGTG_21766
Uncharacterized protein.
    
 0.755
PGTG_15305
Thymidylate synthase.
  
 
 0.754
PGTG_10935
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.743
PGTG_16050
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.743
PGTG_17029
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.743
PGTG_03648
Nudix hydrolase domain-containing protein.
    
  0.741
PGTG_04663
Nucleoside diphosphate kinase.
   
 
 0.726
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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