STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_20798Uncharacterized protein. (586 aa)    
Predicted Functional Partners:
PGTG_11688
RNase_PH domain-containing protein.
    
   0.854
PGTG_10610
Uncharacterized protein.
    
 0.680
PGTG_02327
Importin N-terminal domain-containing protein.
   
 
 0.613
PGTG_14522
Glycerol kinase; Belongs to the FGGY kinase family.
  
 
 0.569
PGTG_07382
Uncharacterized protein.
  
 
 0.546
PGTG_13939
Uncharacterized protein.
  
 
 0.546
PGTG_17224
ULP_PROTEASE domain-containing protein.
     
 0.546
PGTG_21376
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.531
PGTG_21377
Clat_adaptor_s domain-containing protein.
    
 
 0.531
PGTG_17260
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.514
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.