STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_20949Uncharacterized protein. (1136 aa)    
Predicted Functional Partners:
PGTG_10868
Uncharacterized protein.
  
  0.456
PGTG_00903
CxC1 domain-containing protein.
  
  0.454
PGTG_01440
Uncharacterized protein.
  
     0.453
PGTG_20921
Uncharacterized protein.
  
  0.452
PGTG_11644
Uncharacterized protein.
  
  0.450
PGTG_03979
Uncharacterized protein.
  
  0.448
PGTG_15123
CxC1 domain-containing protein.
  
  0.446
PGTG_10853
Uncharacterized protein.
  
  0.445
PGTG_06982
Uncharacterized protein.
  
  0.443
PGTG_22187
CxC1 domain-containing protein.
  
  0.442
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.