STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGTG_22510Uncharacterized protein. (721 aa)    
Predicted Functional Partners:
PGTG_00597
NOT2_3_5 domain-containing protein.
    
0.999
PGTG_06508
Uncharacterized protein.
    
 0.999
PGTG_10582
Uncharacterized protein.
    
 0.996
PGTG_16274
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.995
PGTG_08172
Uncharacterized protein.
   
 0.994
PGTG_03830
Uncharacterized protein.
    
 0.988
PGTG_19531
Uncharacterized protein.
    
 0.988
PGTG_04057
Uncharacterized protein.
   
 
 0.973
PGTG_02128
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.963
PGTG_00665
Transcriptional adapter 2-alpha.
    
 
 0.881
Your Current Organism:
Puccinia graminis
NCBI taxonomy Id: 418459
Other names: P. graminis f. sp. tritici CRL 75-36-700-3, Puccinia graminis f. sp. tritici CRL 75-36-700-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.