STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW24685.1ATP-binding cassette, subfamily C, CydCD. (1189 aa)    
Predicted Functional Partners:
SDW24729.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
  
 0.994
SDW24768.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
  
 0.989
SDZ34079.1
Cytochrome bd-type quinol oxidase, subunit 2.
 
  
 0.986
SDZ58513.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
  
 0.983
SDZ34095.1
Cytochrome d ubiquinol oxidase subunit I.
 
  
 0.969
SDZ58500.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
  
 0.965
SDZ34067.1
ATP-binding cassette, subfamily C, CydD.
 
 
0.958
SDZ34055.1
ATP-binding cassette, subfamily C/ATP-binding cassette, subfamily C, CydC.
 
 
0.957
SDZ58534.1
ATP-binding cassette, subfamily C, CydC.
 
 
0.880
SDY11703.1
ABC transporter.
  
 
 0.785
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.