STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW67759.1ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (379 aa)    
Predicted Functional Partners:
SDY17107.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.953
SDY92738.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.953
SDW75691.1
Hypothetical protein.
  
 0.921
SDX75198.1
NADH dehydrogenase subunit F.
  
 
 0.914
SDZ17694.1
NADH:ubiquinone oxidoreductase, NADH-binding subunit (chain F).
  
 
 0.898
SDZ18741.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
  
 
 0.898
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
   
 
 0.875
SDX20198.1
ferredoxin--NADP+ reductase.
    
 0.870
SDW95071.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.838
SDW14084.1
Nitrogen fixation protein NifU.
  
  
 0.832
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.