STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX64983.1N-carbamoyl-L-amino-acid hydrolase. (424 aa)    
Predicted Functional Partners:
SDY07507.1
Dihydropyrimidinase.
 
 
 0.850
SDX64403.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
 
 
  0.755
SDX44767.1
Allantoinase.
  
 
 0.735
SDW16353.1
Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Belongs to the dihydroorotate dehydrogenase family.
  
 0.728
SDZ31473.1
(S)-ureidoglycine aminohydrolase.
 
 
 0.713
SDZ21593.1
Polysaccharide deacetylase.
 
  
  0.712
SDZ21606.1
Polysaccharide deacetylase.
 
  
  0.696
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 
 0.684
SDY27488.1
Predicted amidohydrolase.
 
  
  0.682
SDX20198.1
ferredoxin--NADP+ reductase.
  
 
 0.674
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.