STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX97291.1Glycosyl transferase family 2. (263 aa)    
Predicted Functional Partners:
SDY92738.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.813
SDY17107.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.790
SDX97319.1
Methyltransferase domain-containing protein.
       0.777
SDX97253.1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.775
SDX35879.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.667
SDW26809.1
Glycosyltransferase, GT2 family.
  
 
 0.611
SDX97343.1
Anthranilate phosphoribosyltransferase.
       0.603
SDX87135.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.601
SDX97228.1
tyrosyl-tRNA synthetase.
       0.575
SDX97180.1
L-iditol 2-dehydrogenase.
       0.568
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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