STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY89161.1Polar amino acid transport system ATP-binding protein. (243 aa)    
Predicted Functional Partners:
SDY89140.1
ABC transmembrane type-1 domain-containing protein; L-histidine-binding protein /L-histidine ABC transporter membrane protein /L-arginine-binding protein.
 0.997
SDX30049.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.984
SDX30072.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.984
SDY42707.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.981
SDZ21653.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.980
SDX25238.1
Polar amino acid transport system permease protein.
 0.979
SDY64641.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.979
SDW32707.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.978
SDX25205.1
Polar amino acid transport system permease protein.
 0.978
SDY64667.1
Polar amino acid transport system permease protein.
 0.978
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.