STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY92719.1Pyridine nucleotide-disulphide oxidoreductase. (407 aa)    
Predicted Functional Partners:
SDY92703.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
 
     0.953
SDY92763.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   0.927
SDY35586.1
FAD-dependent urate hydroxylase.
  
  0.853
SDY92783.1
UDP-glucose 4-epimerase.
   
   0.839
SDY92738.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
       0.806
SDX45154.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
  0.802
SDY92805.1
Spore germination protein YaaH.
 
     0.791
SDY41416.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
  
  
  0.790
SDY41449.1
Xanthine dehydrogenase YagS FAD-binding subunit.
  
  
  0.788
SDY92685.1
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.756
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.