STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ57266.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SDZ57257.1
Hypothetical protein.
       0.773
SDZ57275.1
Hypothetical protein.
       0.773
SDZ57283.1
Hypothetical protein.
       0.773
SDZ57290.1
Hypothetical protein.
       0.773
SDZ57298.1
Hypothetical protein.
       0.773
SDZ57204.1
Hypothetical protein.
       0.458
SDZ57214.1
Hypothetical protein.
       0.458
SDZ57222.1
Hypothetical protein.
       0.458
SDZ57232.1
Hypothetical protein.
       0.458
SDZ57239.1
Hypothetical protein.
       0.458
Your Current Organism:
Saccharopolyspora shandongensis
NCBI taxonomy Id: 418495
Other names: CGMCC 4.3530, JCM 14614, S. shandongensis, Saccharopolyspora shandongensis Zhang et al. 2008, strain 88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.