STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OMG51616.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
OMG56387.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.910
OMG53928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.906
OMG55166.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.806
OMG54025.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OMG56388.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OMG54988.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OMG52542.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OMG56129.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
OMG56301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
OMG56524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
Your Current Organism:
Azonexus hydrophilus
NCBI taxonomy Id: 418702
Other names: A. hydrophilus, Azonexus hydrophilus Chou et al. 2008, BCRC 17657, DSM 23864, LMG 24005, LMG:24005, beta proteobacterium IMCC1716, beta proteobacterium d8-2, strain d8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.