STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bathy02g04980Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
Bathy18g00160
Novel protein containing a galactose binding lectin domain.
    
 
 0.974
Bathy15g01280
Uncharacterized protein.
    
 
 0.734
Bathy02g01550
Protein kinase domain-containing protein.
    
 0.697
Bathy14g01340
U1 small nuclear ribonucleoprotein A.
    
 0.530
Bathy10g00710
Sm domain-containing protein.
    
  0.470
Bathy18g00730
Sm domain-containing protein.
    
 0.470
Bathy14g00600
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.470
Bathy12g02400
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.464
Bathy02g05560
Small nuclear ribonucleoprotein G.
    
  0.458
Bathy01g03810
Uncharacterized protein.
    
  0.439
Your Current Organism:
Bathycoccus prasinos
NCBI taxonomy Id: 41875
Other names: B. prasinos
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