Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bathy03g01930 | Bathy05g01500 | K8ECL4 | K8EFZ2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hemolysin A. | 0.548 |
Bathy03g01930 | Bathy10g04150 | K8ECL4 | K8EJ46 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Thioredoxin reductase. | 0.481 |
Bathy03g01930 | Bathy12g03500 | K8ECL4 | K8F2H8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.946 |
Bathy03g02260 | Bathy05g01500 | K8ECE1 | K8EFZ2 | Amidohydro_3 domain-containing protein. | Hemolysin A. | 0.618 |
Bathy05g01500 | Bathy03g01930 | K8EFZ2 | K8ECL4 | Hemolysin A. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.548 |
Bathy05g01500 | Bathy03g02260 | K8EFZ2 | K8ECE1 | Hemolysin A. | Amidohydro_3 domain-containing protein. | 0.618 |
Bathy05g01500 | Bathy08g03130 | K8EFZ2 | K8EHH5 | Hemolysin A. | O-methyltransferase. | 0.524 |
Bathy05g01500 | Bathy10g04150 | K8EFZ2 | K8EJ46 | Hemolysin A. | Thioredoxin reductase. | 0.541 |
Bathy05g01500 | Bathy11g02820 | K8EFZ2 | K8F1M9 | Hemolysin A. | Uncharacterized protein. | 0.472 |
Bathy05g01500 | Bathy12g00670 | K8EFZ2 | K8ELZ4 | Hemolysin A. | Uncharacterized protein. | 0.567 |
Bathy05g01500 | Bathy12g03500 | K8EFZ2 | K8F2H8 | Hemolysin A. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.548 |
Bathy05g01500 | Bathy13g02420 | K8EFZ2 | K8FC55 | Hemolysin A. | Uncharacterized protein. | 0.518 |
Bathy05g01500 | Bathy14g01820 | K8EFZ2 | K8FCR2 | Hemolysin A. | Uncharacterized protein. | 0.518 |
Bathy05g01500 | NAD_kinase | K8EFZ2 | K8EBP5 | Hemolysin A. | NAD kinase. | 0.618 |
Bathy08g03130 | Bathy05g01500 | K8EHH5 | K8EFZ2 | O-methyltransferase. | Hemolysin A. | 0.524 |
Bathy10g04150 | Bathy03g01930 | K8EJ46 | K8ECL4 | Thioredoxin reductase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.481 |
Bathy10g04150 | Bathy05g01500 | K8EJ46 | K8EFZ2 | Thioredoxin reductase. | Hemolysin A. | 0.541 |
Bathy10g04150 | Bathy12g00670 | K8EJ46 | K8ELZ4 | Thioredoxin reductase. | Uncharacterized protein. | 0.539 |
Bathy10g04150 | Bathy12g03500 | K8EJ46 | K8F2H8 | Thioredoxin reductase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.481 |
Bathy10g04150 | Bathy13g02420 | K8EJ46 | K8FC55 | Thioredoxin reductase. | Uncharacterized protein. | 0.435 |
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