Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bathy02g00030 | Bathy02g00050 | K8F0F3 | K8EB27 | AMP deaminase. | Stationary phase survival protein SurE. | 0.901 |
Bathy02g00030 | Bathy07g02840 | K8F0F3 | K8F266 | AMP deaminase. | Guanylate kinase-like domain-containing protein. | 0.540 |
Bathy02g00030 | Bathy08g03600 | K8F0F3 | K8EIA5 | AMP deaminase. | Hypoxanthine phosphoribosyltransferase. | 0.986 |
Bathy02g00030 | Bathy13g02660 | K8F0F3 | K8EN49 | AMP deaminase. | Adenine phosphoribosyltransferase. | 0.990 |
Bathy02g00030 | Bathy14g02940 | K8F0F3 | K8END6 | AMP deaminase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.974 |
Bathy02g00030 | Bathy15g02360 | K8F0F3 | K8EPR8 | AMP deaminase. | Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.932 |
Bathy02g00030 | Bathy15g02490 | K8F0F3 | K8ENT1 | AMP deaminase. | Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. | 0.935 |
Bathy02g00030 | Bathy16g00930 | K8F0F3 | K8FD62 | AMP deaminase. | GMP synthase. | 0.689 |
Bathy02g00030 | Bathy17g00050 | K8F0F3 | K8ER74 | AMP deaminase. | Uncharacterized protein. | 0.932 |
Bathy02g00030 | PURA | K8F0F3 | K8EVE4 | AMP deaminase. | Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.963 |
Bathy02g00050 | Bathy02g00030 | K8EB27 | K8F0F3 | Stationary phase survival protein SurE. | AMP deaminase. | 0.901 |
Bathy02g00050 | Bathy07g02840 | K8EB27 | K8F266 | Stationary phase survival protein SurE. | Guanylate kinase-like domain-containing protein. | 0.903 |
Bathy02g00050 | Bathy08g03600 | K8EB27 | K8EIA5 | Stationary phase survival protein SurE. | Hypoxanthine phosphoribosyltransferase. | 0.902 |
Bathy02g00050 | Bathy13g02660 | K8EB27 | K8EN49 | Stationary phase survival protein SurE. | Adenine phosphoribosyltransferase. | 0.900 |
Bathy02g00050 | Bathy14g02940 | K8EB27 | K8END6 | Stationary phase survival protein SurE. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.900 |
Bathy02g00050 | Bathy15g02360 | K8EB27 | K8EPR8 | Stationary phase survival protein SurE. | Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.900 |
Bathy02g00050 | Bathy15g02490 | K8EB27 | K8ENT1 | Stationary phase survival protein SurE. | Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. | 0.900 |
Bathy02g00050 | Bathy16g00930 | K8EB27 | K8FD62 | Stationary phase survival protein SurE. | GMP synthase. | 0.900 |
Bathy02g00050 | Bathy17g00050 | K8EB27 | K8ER74 | Stationary phase survival protein SurE. | Uncharacterized protein. | 0.900 |
Bathy02g00050 | PURA | K8EB27 | K8EVE4 | Stationary phase survival protein SurE. | Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.900 |
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